Your attached log shows a regular Klipper start with current MCU versions:
Loaded MCU 'mcu' 121 commands (v0.13.0-0-g61c0c8d2 / gcc: (15:7-2018-q2-6) 7.3.1 20180622 (release) [ARM/embedded-7-branch revision 261907] binutils: (2.31.1-12+11) 2.31.1)
...
Loaded MCU 'MKS_THR' 121 commands (v0.13.0-0-g61c0c8d2 / gcc: (15:7-2018-q2-6) 7.3.1 20180622 (release) [ARM/embedded-7-branch revision 261907] binutils: (2.31.1-12+11) 2.31.1)
MCU 'MKS_THR' config: BUS_PINS_spi0a=gpio0,gpio3,gpio2 BUS_PINS_i2c0h=gpio28,gpio29 BUS_PINS_spi0c=gpio16,gpio19,gpio18 BUS_PINS_spi0d=gpio20,gpio23,gpio22 BUS_PINS_i2c0b=gpio4,gpio5 BUS_PINS_i2c0c=gpio8,gpio9 BUS_PINS_i2c0a=gpio0,gpio1 BUS_PINS_i2c0f=gpio20,gpio21 BUS_PINS_i2c0g=gpio24,gpio25 BUS_PINS_i2c0d=gpio12,gpio13 BUS_PINS_i2c0e=gpio16,gpio17 CLOCK_FREQ=12000000 BUS_PINS_spi1_gpio12_gpio11_gpio10=gpio12,gpio11,gpio10 ADC_MAX=4095 PWM_MAX=255 BUS_PINS_spi0b=gpio4,gpio7,gpio6 STEPPER_OPTIMIZED_EDGE=2 BUS_PINS_spi0_gpio4_gpio3_gpio2=gpio4,gpio3,gpio2 BUS_PINS_i2c1a=gpio2,gpio3 BUS_PINS_i2c1c=gpio10,gpio11 BUS_PINS_i2c1b=gpio6,gpio7 BUS_PINS_i2c1e=gpio18,gpio19 BUS_PINS_i2c1d=gpio14,gpio15 BUS_PINS_i2c1g=gpio26,gpio27 BUS_PINS_i2c1f=gpio22,gpio23 BUS_PINS_spi1_gpio12_gpio15_gpio14=gpio12,gpio15,gpio14 BUS_PINS_spi1_gpio24_gpio27_gpio26=gpio24,gpio27,gpio26 BUS_PINS_spi1c=gpio24,gpio27,gpio26 BUS_PINS_spi1b=gpio12,gpio15,gpio14 BUS_PINS_spi1a=gpio8,gpio11,gpio10 STATS_SUMSQ_BASE=256 STEPPER_STEP_BOTH_EDGE=1 BUS_PINS_spi0_gpio4_gpio7_gpio6=gpio4,gpio7,gpio6 BUS_PINS_spi0_gpio20_gpio23_gpio22=gpio20,gpio23,gpio22 BUS_PINS_spi1_gpio8_gpio11_gpio10=gpio8,gpio11,gpio10 BUS_PINS_spi0_gpio0_gpio3_gpio2=gpio0,gpio3,gpio2 BUS_PINS_spi0_gpio16_gpio19_gpio18=gpio16,gpio19,gpio18 MCU=rp2040
Configured MCU 'mcu' (1024 moves)
Configured MCU 'MKS_THR' (1024 moves)
...
Starting heater checks for heater_bed
Starting heater checks for extruder
Stats 45.2: gcodein=0 mcu: mcu_awake=0.000 mcu_task_avg=0.000000 mcu_task_stddev=0.000000 bytes_write=2034 bytes_read=5907 bytes_retransmit=9 bytes_invalid=0 send_seq=186 receive_seq=186 retransmit_seq=2 srtt=0.001 rttvar=0.000 rto=0.025 ready_bytes=0 upcoming_bytes=0 freq=72007271 MKS_THR: mcu_awake=0.002 mcu_task_avg=0.000004 mcu_task_stddev=0.000005 bytes_write=1304 bytes_read=5232 bytes_retransmit=9 bytes_invalid=0 send_seq=135 receive_seq=135 retransmit_seq=2 srtt=0.001 rttvar=0.000 rto=0.025 ready_bytes=0 upcoming_bytes=0 freq=12008187 adj=12021173 heater_bed: target=0 temp=28.6 pwm=0.000 sysload=3.11 cputime=7.274 memavail=719084 print_time=364.363 buffer_time=0.247 print_stall=0 extruder: target=0 temp=26.8 pwm=0.000
There are no obvious errors in this log.