TBH, the installation looks a bit messy and has unsupported third-party modules installed (which we do not support). At least one of these modules is either unnecessary or potentially detrimental (GitHub - andrewmcgr/klipper_tmc_autotune: TMC stepper driver autotuning Klipper python extra).
Additionally, there are some additional scripts being called, and it is unclear what they do or their quality.
I would recommend starting clean and setting up the printer yourself. This way, you know exactly what is on it. You can use a new SD card and keep the old one as a backup.
For a step-by-step approach, see: